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Research · 02 of 05

A GATM gene variant raises creatinine without lowering true kidney function

When creatinine-based eGFR seems inconsistent with the patient, check cystatin C.

Design
Commentary
Population
People of African ancestry with a GATM variant
Primary outcome
Effect of the variant on serum creatinine and eGFR bias
Effect
Raised serum creatinine without change in measured kidney function

This Kidney International commentary discusses the identification of an African ancestry-specific variant in the glycine amidinotransferase (GATM) gene. The variant increases creatine synthesis and therefore serum creatinine, without changing measured glomerular filtration rate.

This offers a biological explanation for part of the residual bias in creatinine-based eGFR in people of African ancestry, a bias that race-based correction factors tried, imperfectly, to address before most were dropped.

The broader lesson applies everywhere: creatinine reflects muscle and creatine metabolism as well as filtration. When a creatinine-based eGFR does not fit the clinical picture, measuring cystatin C or a combined equation can help.

  • Creatinine-based eGFR can underestimate true GFR when creatinine production is high for non-renal reasons.
  • Use cystatin C or combined creatinine-cystatin equations when eGFR does not fit the patient.
  • Genetic variants, muscle mass and diet all influence creatinine independently of the kidney.
  • Consider measured GFR when precise function matters, such as for drug dosing or kidney donation.

Why it matters

A mislabelled CKD stage affects drug dosing, eligibility for treatments and patient anxiety.

Don't overread it

This is a commentary on genetic findings; it does not propose a new equation or ancestry-based correction.

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